not sure what the two screenshots are supposed to show, but the log has models and wmos failing to load. Not sure if those are actually the issue, but you should try fixing them first.
The models and WMO's failing to load is the issue I'm trying to solve. I'm not entirely sure what Noggit accesses in order to load them up. Project/word contains the ADT's and WDT's that have been edited as far as I understand, and the files/folders have remained unchanged since the move.
What is it that Noggit can't find and where would it be located?
I can see in the log, for example "world\wmo\outland\floatingrocks\nagrand_rockfloating_waterfalls.wmo" can't be found, but where exactly is Noggit pulling this model from, under what configuration, etc.?